Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Gm11653-201ENSMUST00000119992 1009 ntBASIC10.55□□□□□ -0.72
Usp47Q8BY87 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Gm5283-201ENSMUST00000177874 334 ntBASIC10.55□□□□□ -0.72
Usp47Q8BY87 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 AC133948.2-201ENSMUST00000217850 378 ntBASIC10.55□□□□□ -0.72
Usp47Q8BY87 Gm2089-201ENSMUST00000218294 479 ntBASIC10.55□□□□□ -0.72
Usp47Q8BY87 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 AC117949.1-201ENSMUST00000225547 419 ntBASIC10.55□□□□□ -0.72
Usp47Q8BY87 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 AC154522.1-201ENSMUST00000224647 1903 ntBASIC10.55□□□□□ -0.72
Usp47Q8BY87 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Usp47Q8BY87 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm13545-201ENSMUST00000119044 482 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm11945-201ENSMUST00000120551 476 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm14787-201ENSMUST00000121236 388 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm37260-201ENSMUST00000193748 1251 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm7512-201ENSMUST00000195217 1170 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm46311-201ENSMUST00000217971 203 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 AC159205.2-201ENSMUST00000223759 816 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Usp47Q8BY87 AC166574.5-201ENSMUST00000227438 1432 ntBASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC10.54□□□□□ -0.72
Usp47Q8BY87 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm13130-201ENSMUST00000119195 1166 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm22795-201ENSMUST00000157233 118 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm19211-201ENSMUST00000200251 1206 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm44590-201ENSMUST00000206161 391 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm18860-201ENSMUST00000212029 764 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 AC120002.1-201ENSMUST00000218456 331 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm2065-201ENSMUST00000194697 2757 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 AC133598.5-201ENSMUST00000224937 1517 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Usp47Q8BY87 Gm43533-201ENSMUST00000202933 2936 ntBASIC10.53□□□□□ -0.72
Usp47Q8BY87 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Usp47Q8BY87 Gm13768-201ENSMUST00000116469 929 ntBASIC10.52□□□□□ -0.72
Usp47Q8BY87 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Usp47Q8BY87 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC10.52□□□□□ -0.72
Usp47Q8BY87 Gm43928-201ENSMUST00000203737 409 ntBASIC10.52□□□□□ -0.72
Usp47Q8BY87 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC10.52□□□□□ -0.72
Usp47Q8BY87 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC10.52□□□□□ -0.72
Usp47Q8BY87 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms