Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm24519-201ENSMUST00000104507 132 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm6654-201ENSMUST00000118950 348 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm24383-201ENSMUST00000122691 333 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Mir6911-201ENSMUST00000184241 69 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm43656-201ENSMUST00000197882 434 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm4751-201ENSMUST00000200620 1105 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm43905-201ENSMUST00000204516 204 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 AC123917.1-201ENSMUST00000228063 1048 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Gm15109-201ENSMUST00000133085 2026 ntBASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC9.75□□□□□ -0.85
Col16a1Q8BLX7 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Pramel-201ENSMUST00000118979 1383 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm25311-201ENSMUST00000104136 132 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Apc-ps1-201ENSMUST00000119356 470 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm12778-201ENSMUST00000122341 333 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm7452-201ENSMUST00000200764 788 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm2654-201ENSMUST00000221381 1592 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 AC132465.1-201ENSMUST00000219938 1307 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm20731-201ENSMUST00000193462 2288 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 AC161247.1-201ENSMUST00000217744 2295 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col16a1Q8BLX7 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm16487-201ENSMUST00000105048 4037 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm13732-201ENSMUST00000117753 535 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm9359-201ENSMUST00000163721 1221 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm3760-201ENSMUST00000167475 804 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm29048-201ENSMUST00000185342 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm29403-201ENSMUST00000185491 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28234-201ENSMUST00000185657 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28248-201ENSMUST00000186093 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm29633-202ENSMUST00000186217 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28829-201ENSMUST00000186231 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28261-201ENSMUST00000186417 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28983-201ENSMUST00000186685 614 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28815-201ENSMUST00000186751 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28608-201ENSMUST00000186860 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28122-201ENSMUST00000187088 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28150-201ENSMUST00000187305 614 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28420-201ENSMUST00000187340 615 ntBASIC9.73□□□□□ -0.85
Col16a1Q8BLX7 Gm28106-201ENSMUST00000187640 615 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms