Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm46995-201ENSMUST00000223445 1378 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Mir501-201ENSMUST00000102296 109 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm25502-201ENSMUST00000104428 131 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm14561-201ENSMUST00000117376 798 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm13682-201ENSMUST00000117524 702 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm12220-201ENSMUST00000118476 172 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm17097-201ENSMUST00000166414 714 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm25193-201ENSMUST00000176615 97 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm21182-201ENSMUST00000178899 794 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm42489-201ENSMUST00000198964 669 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm7695-201ENSMUST00000220900 641 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 CT025552.1-201ENSMUST00000224561 521 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 AC154646.1-201ENSMUST00000225011 1092 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm4825-201ENSMUST00000079690 408 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm4275-205ENSMUST00000212624 1436 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Gm8700-201ENSMUST00000222187 3054 ntBASIC8.01□□□□□ -1.13
CtifQ6PEE2 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CtifQ6PEE2 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm42874-201ENSMUST00000198888 1774 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm19683-201ENSMUST00000209748 1781 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm42577-201ENSMUST00000201367 3211 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
CtifQ6PEE2 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm6798-201ENSMUST00000119961 360 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm8682-201ENSMUST00000121310 498 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm5809-201ENSMUST00000121854 529 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Mir1907-201ENSMUST00000122509 90 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm13049-201ENSMUST00000133196 757 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm13997-201ENSMUST00000155641 336 ntTSL 3 BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm25455-201ENSMUST00000157946 325 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm22484-201ENSMUST00000157992 306 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm26784-201ENSMUST00000181666 410 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm44245-201ENSMUST00000204304 232 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm38840-201ENSMUST00000204716 843 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8□□□□□ -1.13
CtifQ6PEE2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 AC139130.1-201ENSMUST00000228281 620 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 AC137117.2-201ENSMUST00000228560 282 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm24696-201ENSMUST00000083878 134 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Tcl1b1-201ENSMUST00000085043 1040 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm10335-201ENSMUST00000096020 468 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Gm10132-201ENSMUST00000099431 468 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Gm42940-201ENSMUST00000200361 2362 ntBASIC8□□□□□ -1.13
CtifQ6PEE2 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8□□□□□ -1.13
CtifQ6PEE2 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms