Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smarcc1P97496 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm15316-201ENSMUST00000121082 421 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm27218-201ENSMUST00000183745 392 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm37526-201ENSMUST00000194640 619 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC9.59□□□□□ -0.87
Smarcc1P97496 CT030238.4-202ENSMUST00000226143 745 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm9985-201ENSMUST00000044101 510 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Gm42519-201ENSMUST00000199282 3656 ntBASIC9.59□□□□□ -0.87
Smarcc1P97496 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smarcc1P97496 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smarcc1P97496 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Smarcc1P97496 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Smarcc1P97496 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.58□□□□□ -0.88
Smarcc1P97496 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gm15578-201ENSMUST00000117320 475 ntBASIC9.58□□□□□ -0.88
Smarcc1P97496 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gm42760-201ENSMUST00000199814 311 ntBASIC9.58□□□□□ -0.88
Smarcc1P97496 Gm45394-201ENSMUST00000209240 1175 ntBASIC9.58□□□□□ -0.88
Smarcc1P97496 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.58□□□□□ -0.88
Smarcc1P97496 AC115304.1-202ENSMUST00000226850 837 ntBASIC9.58□□□□□ -0.88
Smarcc1P97496 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gm45873-201ENSMUST00000211865 1915 ntBASIC9.58□□□□□ -0.88
Smarcc1P97496 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smarcc1P97496 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smarcc1P97496 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 AC158595.1-201ENSMUST00000217989 1435 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm13243-201ENSMUST00000117481 565 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm12713-201ENSMUST00000118404 764 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm12174-201ENSMUST00000119853 813 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm11474-201ENSMUST00000120814 277 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm18352-201ENSMUST00000189113 902 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm18593-201ENSMUST00000200754 1139 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm3549-201ENSMUST00000203873 794 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm44279-201ENSMUST00000205154 472 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm10043-201ENSMUST00000210691 235 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm6581-201ENSMUST00000214545 260 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm5654-201ENSMUST00000217787 475 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC9.57□□□□□ -0.88
Smarcc1P97496 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Smarcc1P97496 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Gm232-201ENSMUST00000216549 2559 ntBASIC9.57□□□□□ -0.88
Smarcc1P97496 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms