Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm1982-201ENSMUST00000188615 1887 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SgcaP82350 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SgcaP82350 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SgcaP82350 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
SgcaP82350 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Gm11922-201ENSMUST00000118967 475 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm12170-201ENSMUST00000119281 300 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm12955-201ENSMUST00000119689 957 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm14143-201ENSMUST00000121686 357 ntBASIC6.3□□□□□ -1.4
SgcaP82350 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC6.3□□□□□ -1.4
SgcaP82350 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC6.3□□□□□ -1.4
SgcaP82350 Gm19840-201ENSMUST00000169624 882 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SgcaP82350 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm27043-201ENSMUST00000182807 958 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm8529-201ENSMUST00000183298 745 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm18552-201ENSMUST00000187425 538 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm29362-201ENSMUST00000187898 133 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm7369-201ENSMUST00000192738 936 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Ighv1-33-201ENSMUST00000193220 350 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.3□□□□□ -1.4
SgcaP82350 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 AC153821.1-203ENSMUST00000218105 607 ntTSL 3 BASIC6.3□□□□□ -1.4
SgcaP82350 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SgcaP82350 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Tssk4-203ENSMUST00000226497 1235 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Tssk4-206ENSMUST00000228041 1217 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.3□□□□□ -1.4
SgcaP82350 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SgcaP82350 Gm9105-201ENSMUST00000120160 1398 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm5975-201ENSMUST00000185256 1399 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.3□□□□□ -1.4
SgcaP82350 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.29□□□□□ -1.4
SgcaP82350 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SgcaP82350 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Gm8832-201ENSMUST00000119890 395 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Gm11662-201ENSMUST00000121389 1193 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.29□□□□□ -1.4
SgcaP82350 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.29□□□□□ -1.4
SgcaP82350 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 Gm25193-201ENSMUST00000176615 97 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SgcaP82350 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SgcaP82350 Gm26607-201ENSMUST00000180661 867 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Gm37247-201ENSMUST00000192549 730 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Gm8388-201ENSMUST00000193000 756 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SgcaP82350 Gm42525-201ENSMUST00000196257 527 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 Gm43471-201ENSMUST00000197550 467 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Gm2939-201ENSMUST00000198496 478 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.29□□□□□ -1.4
SgcaP82350 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SgcaP82350 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC6.29□□□□□ -1.4
SgcaP82350 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.29□□□□□ -1.4
SgcaP82350 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SgcaP82350 AC123058.1-201ENSMUST00000223748 437 ntBASIC6.29□□□□□ -1.4
SgcaP82350 AC124736.1-201ENSMUST00000226382 419 ntBASIC6.29□□□□□ -1.4
SgcaP82350 AC164978.2-201ENSMUST00000226645 857 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 526.6 ms