Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm45795-201ENSMUST00000211847 400 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm7727-201ENSMUST00000219830 671 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 AC147096.1-201ENSMUST00000227648 352 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm28791-201ENSMUST00000185888 1779 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.62□□□□□ -1.03
Hmgb1P63158 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Hmgb1P63158 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hmgb1P63158 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hmgb1P63158 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm22426-201ENSMUST00000103811 96 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm23946-201ENSMUST00000104423 197 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm22900-201ENSMUST00000104538 130 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm14056-201ENSMUST00000117198 642 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm11318-201ENSMUST00000118640 961 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC8.61□□□□□ -1.03
Hmgb1P63158 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm7734-201ENSMUST00000182832 1011 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm29362-201ENSMUST00000187898 133 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm29143-201ENSMUST00000189462 201 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm45074-201ENSMUST00000209091 1240 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 AC132384.1-201ENSMUST00000219908 1195 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm20302-201ENSMUST00000080671 275 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Vaultrc5-201ENSMUST00000083211 143 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm24696-201ENSMUST00000083878 134 ntBASIC8.61□□□□□ -1.03
Hmgb1P63158 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Hmgb1P63158 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb1P63158 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm24257-201ENSMUST00000104472 131 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm14576-201ENSMUST00000118073 1111 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm6689-201ENSMUST00000130905 481 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm6394-201ENSMUST00000197077 477 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm17977-201ENSMUST00000198743 574 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm9057-201ENSMUST00000198791 296 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm4602-201ENSMUST00000203198 308 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hmgb1P63158 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC8.6□□□□□ -1.03
Hmgb1P63158 AC152946.3-201ENSMUST00000219424 280 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.6□□□□□ -1.03
Hmgb1P63158 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb1P63158 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms