Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Tpm1P58771 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.27□□□□□ -1.09
Tpm1P58771 Gm12883-201ENSMUST00000117867 364 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Gm11416-201ENSMUST00000119111 863 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC8.27□□□□□ -1.09
Tpm1P58771 Gm12634-201ENSMUST00000122157 992 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Gm11895-201ENSMUST00000122165 467 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Gm26048-201ENSMUST00000157305 142 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 Mir3078-201ENSMUST00000175231 87 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Gm17828-201ENSMUST00000183380 799 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC8.27□□□□□ -1.09
Tpm1P58771 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 AC130829.2-201ENSMUST00000222931 127 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Tpm1P58771 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Tpm1P58771 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.27□□□□□ -1.09
Tpm1P58771 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Tpm1P58771 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Tpm1P58771 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm24938-201ENSMUST00000102225 110 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Tpm1P58771 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm15576-201ENSMUST00000117806 583 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm8802-201ENSMUST00000118633 740 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm25372-201ENSMUST00000158161 255 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm28180-201ENSMUST00000189608 722 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm29462-201ENSMUST00000191458 288 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Trbv9-201ENSMUST00000194494 290 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm6394-201ENSMUST00000197077 477 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm8952-201ENSMUST00000206828 1102 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm3198-201ENSMUST00000208725 1026 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 AC163038.1-201ENSMUST00000223632 1142 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Tpm1P58771 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm45088-201ENSMUST00000207066 1408 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.26□□□□□ -1.09
Tpm1P58771 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Tpm1P58771 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Tpm1P58771 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC8.25□□□□□ -1.09
Tpm1P58771 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Tpm1P58771 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Tpm1P58771 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms