Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cux1P53564 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cux1P53564 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Gm44531-201ENSMUST00000208364 2000 ntBASIC11.43□□□□□ -0.58
Cux1P53564 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cux1P53564 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Gm42576-201ENSMUST00000202336 2846 ntBASIC11.43□□□□□ -0.58
Cux1P53564 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 Gm45746-201ENSMUST00000212623 2447 ntBASIC11.43□□□□□ -0.58
Cux1P53564 Gm15596-201ENSMUST00000121139 784 ntBASIC11.43□□□□□ -0.58
Cux1P53564 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC11.43□□□□□ -0.58
Cux1P53564 Gm2709-201ENSMUST00000142979 350 ntBASIC11.43□□□□□ -0.58
Cux1P53564 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC11.43□□□□□ -0.58
Cux1P53564 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC11.43□□□□□ -0.58
Cux1P53564 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Cux1P53564 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cux1P53564 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cux1P53564 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cux1P53564 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Gm43168-201ENSMUST00000201039 1612 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Gm26144-201ENSMUST00000104475 132 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Gm13183-201ENSMUST00000118615 789 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Gm9439-201ENSMUST00000119554 973 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Gm37383-201ENSMUST00000191750 745 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC11.42□□□□□ -0.58
Cux1P53564 Gm43772-201ENSMUST00000202052 379 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC11.42□□□□□ -0.58
Cux1P53564 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cux1P53564 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cux1P53564 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 CT573019.1-201ENSMUST00000227762 1689 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Gm38331-201ENSMUST00000195719 2671 ntBASIC11.42□□□□□ -0.58
Cux1P53564 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cux1P53564 Gm9585-201ENSMUST00000219681 1404 ntBASIC11.42□□□□□ -0.58
Cux1P53564 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cux1P53564 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cux1P53564 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 AC159196.3-201ENSMUST00000224307 1841 ntBASIC11.41□□□□□ -0.58
Cux1P53564 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cux1P53564 Gm5166-201ENSMUST00000121332 573 ntBASIC11.41□□□□□ -0.58
Cux1P53564 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC11.41□□□□□ -0.58
Cux1P53564 Gm24781-201ENSMUST00000157636 117 ntBASIC11.41□□□□□ -0.58
Cux1P53564 Gm3326-201ENSMUST00000164656 1043 ntBASIC11.41□□□□□ -0.58
Cux1P53564 Gm24812-201ENSMUST00000175315 284 ntBASIC11.41□□□□□ -0.58
Cux1P53564 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Gm29464-201ENSMUST00000187692 513 ntBASIC11.41□□□□□ -0.58
Cux1P53564 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC11.41□□□□□ -0.58
Cux1P53564 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC11.41□□□□□ -0.58
Cux1P53564 Gm45497-201ENSMUST00000211701 740 ntBASIC11.41□□□□□ -0.58
Cux1P53564 AC127242.3-201ENSMUST00000222009 580 ntBASIC11.41□□□□□ -0.58
Cux1P53564 AC165157.1-201ENSMUST00000222981 580 ntBASIC11.41□□□□□ -0.58
Cux1P53564 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cux1P53564 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cux1P53564 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cux1P53564 Gm45174-201ENSMUST00000208884 3065 ntBASIC11.41□□□□□ -0.58
Cux1P53564 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Cux1P53564 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cux1P53564 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cux1P53564 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cux1P53564 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cux1P53564 Gm14976-201ENSMUST00000117055 1394 ntBASIC11.4□□□□□ -0.58
Cux1P53564 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cux1P53564 Gm24545-201ENSMUST00000158651 85 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms