Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm23062-201ENSMUST00000102349 110 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm22150-201ENSMUST00000104447 135 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm26469-201ENSMUST00000116765 121 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm7785-201ENSMUST00000117121 892 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm11969-201ENSMUST00000118848 356 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm26408-201ENSMUST00000157672 127 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm4246-201ENSMUST00000172822 216 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 AC165349.2-201ENSMUST00000219097 426 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 AC154649.2-201ENSMUST00000228189 808 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.18□□□□□ -1.26
Tnfsf4P43488 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Tnfsf4P43488 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm41-201ENSMUST00000116183 1023 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm15576-201ENSMUST00000117806 583 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm13325-201ENSMUST00000118746 806 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm11343-201ENSMUST00000120579 599 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm24530-201ENSMUST00000157948 288 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm25266-201ENSMUST00000158521 304 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm22408-201ENSMUST00000174925 65 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm26980-201ENSMUST00000183321 395 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm29739-201ENSMUST00000191760 529 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm38047-201ENSMUST00000193690 1133 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm38306-201ENSMUST00000193954 237 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Pisrt1-201ENSMUST00000195532 515 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm20223-201ENSMUST00000199932 805 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm44285-201ENSMUST00000203557 940 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm33778-201ENSMUST00000216884 704 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm2089-201ENSMUST00000218294 479 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm45925-202ENSMUST00000219904 1136 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 AC134414.1-201ENSMUST00000228499 1221 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms