Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm43621-201ENSMUST00000202733 2022 ntBASIC7.66□□□□□ -1.18
HttP42859 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HttP42859 Gm37829-201ENSMUST00000193864 2213 ntBASIC7.66□□□□□ -1.18
HttP42859 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.66□□□□□ -1.18
HttP42859 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.66□□□□□ -1.18
HttP42859 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC7.66□□□□□ -1.18
HttP42859 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
HttP42859 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
HttP42859 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Gm24790-201ENSMUST00000104285 132 ntBASIC7.65□□□□□ -1.18
HttP42859 Gm25346-201ENSMUST00000104509 128 ntBASIC7.65□□□□□ -1.18
HttP42859 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.65□□□□□ -1.18
HttP42859 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.65□□□□□ -1.18
HttP42859 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC7.65□□□□□ -1.18
HttP42859 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.65□□□□□ -1.18
HttP42859 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC7.65□□□□□ -1.18
HttP42859 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.65□□□□□ -1.18
HttP42859 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
HttP42859 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
HttP42859 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.65□□□□□ -1.18
HttP42859 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
HttP42859 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 Gm29143-201ENSMUST00000189462 201 ntBASIC7.65□□□□□ -1.18
HttP42859 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HttP42859 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.65□□□□□ -1.18
HttP42859 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
HttP42859 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
HttP42859 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.65□□□□□ -1.19
HttP42859 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
HttP42859 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
HttP42859 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
HttP42859 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
HttP42859 Gm16027-201ENSMUST00000161618 758 ntBASIC7.65□□□□□ -1.19
HttP42859 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.65□□□□□ -1.19
HttP42859 Gm10416-201ENSMUST00000197379 645 ntBASIC7.65□□□□□ -1.19
HttP42859 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Gm5886-202ENSMUST00000203957 522 ntBASIC7.65□□□□□ -1.19
HttP42859 Gm32983-201ENSMUST00000208500 505 ntBASIC7.65□□□□□ -1.19
HttP42859 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC7.65□□□□□ -1.19
HttP42859 Gm16020-201ENSMUST00000084281 210 ntBASIC7.65□□□□□ -1.19
HttP42859 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
HttP42859 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.64□□□□□ -1.19
HttP42859 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.64□□□□□ -1.19
HttP42859 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC7.64□□□□□ -1.19
HttP42859 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.64□□□□□ -1.19
HttP42859 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
HttP42859 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.64□□□□□ -1.19
HttP42859 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC7.64□□□□□ -1.19
HttP42859 Gm26162-201ENSMUST00000157793 132 ntBASIC7.64□□□□□ -1.19
HttP42859 Gm3140-201ENSMUST00000163523 481 ntBASIC7.64□□□□□ -1.19
HttP42859 Gm17366-201ENSMUST00000167629 187 ntBASIC7.64□□□□□ -1.19
HttP42859 Gm4956-202ENSMUST00000178869 672 ntBASIC7.64□□□□□ -1.19
HttP42859 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
HttP42859 Gm44795-201ENSMUST00000205496 319 ntBASIC7.64□□□□□ -1.19
HttP42859 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Gm36758-201ENSMUST00000222594 310 ntBASIC7.64□□□□□ -1.19
HttP42859 Nedd4l-204ENSMUST00000224347 3150 ntBASIC7.64□□□□□ -1.19
HttP42859 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 AC158686.1-201ENSMUST00000218068 2332 ntBASIC7.64□□□□□ -1.19
HttP42859 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Gm37536-201ENSMUST00000194710 2491 ntBASIC7.64□□□□□ -1.19
HttP42859 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
HttP42859 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms