Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm11585-201ENSMUST00000120901 569 ntBASIC11.12□□□□□ -0.63
Chd1P40201 Gm13489-201ENSMUST00000121234 971 ntBASIC11.12□□□□□ -0.63
Chd1P40201 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC11.12□□□□□ -0.63
Chd1P40201 Gm4152-201ENSMUST00000172675 259 ntBASIC11.12□□□□□ -0.63
Chd1P40201 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC11.12□□□□□ -0.63
Chd1P40201 AC158525.1-201ENSMUST00000223806 576 ntBASIC11.12□□□□□ -0.63
Chd1P40201 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd1P40201 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd1P40201 Gm29113-201ENSMUST00000185991 3432 ntBASIC11.12□□□□□ -0.63
Chd1P40201 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd1P40201 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd1P40201 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd1P40201 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Chd1P40201 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chd1P40201 Synpo2-201ENSMUST00000051443 3719 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chd1P40201 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC11.11□□□□□ -0.63
Chd1P40201 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd1P40201 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Gm37499-201ENSMUST00000194683 3478 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd1P40201 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chd1P40201 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chd1P40201 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chd1P40201 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC11.11□□□□□ -0.63
Chd1P40201 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Gm11533-201ENSMUST00000120287 477 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC11.11□□□□□ -0.63
Chd1P40201 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Cfhr3-201ENSMUST00000170441 1022 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Mir7674-201ENSMUST00000184964 63 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd1P40201 Gm2774-201ENSMUST00000213650 1165 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Gm4803-201ENSMUST00000218729 1279 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Gm23456-201ENSMUST00000083335 137 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Gm38123-201ENSMUST00000194990 2779 ntBASIC11.11□□□□□ -0.63
Chd1P40201 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd1P40201 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd1P40201 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd1P40201 Gm12740-201ENSMUST00000118794 308 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Gm5793-201ENSMUST00000119393 630 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd1P40201 Gm23810-201ENSMUST00000175150 74 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Gm7952-201ENSMUST00000180540 984 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Gm38254-201ENSMUST00000192276 1009 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Gm2229-201ENSMUST00000193328 710 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Gm35619-201ENSMUST00000222548 600 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Gm37326-201ENSMUST00000192828 3071 ntBASIC11.1□□□□□ -0.63
Chd1P40201 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd1P40201 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd1P40201 Gm4992-201ENSMUST00000120256 768 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Sms-ps-201ENSMUST00000121773 1101 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm4373-201ENSMUST00000178571 556 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd1P40201 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd1P40201 Gm43867-201ENSMUST00000203860 525 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC11.09□□□□□ -0.63
Chd1P40201 Gm32983-201ENSMUST00000208500 505 ntBASIC11.09□□□□□ -0.63
Chd1P40201 AC120375.2-202ENSMUST00000228722 397 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd1P40201 Gm9521-201ENSMUST00000206656 1516 ntBASIC11.09□□□□□ -0.63
Chd1P40201 Gm44280-201ENSMUST00000204498 3111 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms