Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 AC138284.3-201ENSMUST00000217345 4663 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Gm37139-201ENSMUST00000192134 4419 ntBASIC9.48□□□□□ -0.89
NpcdF8VQB8 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
NpcdF8VQB8 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Hdhd2-208ENSMUST00000148955 3069 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm18359-201ENSMUST00000173024 1459 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm14099-201ENSMUST00000117769 605 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm13525-201ENSMUST00000120607 478 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm11263-201ENSMUST00000121853 749 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm7244-201ENSMUST00000164658 455 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm6100-201ENSMUST00000180253 403 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm6140-201ENSMUST00000192494 966 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm4800-201ENSMUST00000215776 1266 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 AC163667.2-201ENSMUST00000223769 791 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 AC133958.1-201ENSMUST00000227085 961 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm24613-201ENSMUST00000083266 130 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Mir185-201ENSMUST00000083530 65 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC9.47□□□□□ -0.89
NpcdF8VQB8 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NpcdF8VQB8 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC9.47□□□□□ -0.89
NpcdF8VQB8 AC132474.1-201ENSMUST00000214407 3686 ntBASIC9.46□□□□□ -0.89
NpcdF8VQB8 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Gm28240-201ENSMUST00000187560 2053 ntBASIC9.46□□□□□ -0.89
NpcdF8VQB8 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
NpcdF8VQB8 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm12931-201ENSMUST00000117046 324 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm12804-201ENSMUST00000121030 999 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm13726-201ENSMUST00000121278 794 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm23888-201ENSMUST00000122690 253 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm24893-201ENSMUST00000122745 369 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm24057-201ENSMUST00000158616 302 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm8540-201ENSMUST00000168952 732 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Mir6409-201ENSMUST00000184957 92 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm37614-201ENSMUST00000195645 210 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm43711-201ENSMUST00000195994 373 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm18290-201ENSMUST00000202900 844 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm44694-201ENSMUST00000205317 1298 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm4290-201ENSMUST00000206897 814 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm4585-201ENSMUST00000207218 452 ntBASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC9.46□□□□□ -0.9
NpcdF8VQB8 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms