Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.8■□□□□ 0.6
Speer3W4VSP1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.8■□□□□ 0.6
Speer3W4VSP1 Gm6139-201ENSMUST00000079261 882 ntBASIC18.8■□□□□ 0.6
Speer3W4VSP1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Speer3W4VSP1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.79■□□□□ 0.6
Speer3W4VSP1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Speer3W4VSP1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.78■□□□□ 0.6
Speer3W4VSP1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.78■□□□□ 0.6
Speer3W4VSP1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Gm43017-201ENSMUST00000198296 752 ntBASIC18.78■□□□□ 0.6
Speer3W4VSP1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Speer3W4VSP1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.78■□□□□ 0.6
Speer3W4VSP1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Speer3W4VSP1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.77■□□□□ 0.6
Speer3W4VSP1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Smad6-203ENSMUST00000179458 273 ntBASIC18.77■□□□□ 0.6
Speer3W4VSP1 Gm26833-201ENSMUST00000180899 440 ntBASIC18.77■□□□□ 0.6
Speer3W4VSP1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Speer3W4VSP1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
Speer3W4VSP1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Gm43173-201ENSMUST00000202246 593 ntBASIC18.76■□□□□ 0.59
Speer3W4VSP1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Speer3W4VSP1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.75■□□□□ 0.59
Speer3W4VSP1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Speer3W4VSP1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms