Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.18□□□□□ -0.14
PdfS4R2K0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.18□□□□□ -0.14
PdfS4R2K0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
PdfS4R2K0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.17□□□□□ -0.14
PdfS4R2K0 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.17□□□□□ -0.14
PdfS4R2K0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PdfS4R2K0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdfS4R2K0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PdfS4R2K0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.16□□□□□ -0.14
PdfS4R2K0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.16□□□□□ -0.14
PdfS4R2K0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.16□□□□□ -0.14
PdfS4R2K0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PdfS4R2K0 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.16□□□□□ -0.14
PdfS4R2K0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.16□□□□□ -0.14
PdfS4R2K0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PdfS4R2K0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdfS4R2K0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
PdfS4R2K0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdfS4R2K0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.15□□□□□ -0.14
PdfS4R2K0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PdfS4R2K0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PdfS4R2K0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
PdfS4R2K0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdfS4R2K0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
PdfS4R2K0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PdfS4R2K0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PdfS4R2K0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.14□□□□□ -0.15
PdfS4R2K0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.14□□□□□ -0.15
PdfS4R2K0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdfS4R2K0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
PdfS4R2K0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
PdfS4R2K0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 BC021767-201ENSMUST00000126387 1716 ntBASIC14.13□□□□□ -0.15
PdfS4R2K0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Gm21956-201ENSMUST00000179946 522 ntBASIC14.13□□□□□ -0.15
PdfS4R2K0 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.13□□□□□ -0.15
PdfS4R2K0 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.13□□□□□ -0.15
PdfS4R2K0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms