Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nr1h3Q9Z0Y9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Nr1h3Q9Z0Y9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm6576-201ENSMUST00000169678 883 ntBASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm18666-201ENSMUST00000190039 958 ntBASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nr1h3Q9Z0Y9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nr1h3Q9Z0Y9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nr1h3Q9Z0Y9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Nr1h3Q9Z0Y9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.02■□□□□ 0.79
Nr1h3Q9Z0Y9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1h3Q9Z0Y9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1h3Q9Z0Y9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1h3Q9Z0Y9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1h3Q9Z0Y9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1h3Q9Z0Y9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1h3Q9Z0Y9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm11249-201ENSMUST00000117071 859 ntBASIC20■□□□□ 0.79
Nr1h3Q9Z0Y9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1h3Q9Z0Y9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1h3Q9Z0Y9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20■□□□□ 0.79
Nr1h3Q9Z0Y9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1h3Q9Z0Y9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms