Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubd1Q9R1K7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tubd1Q9R1K7 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.92■□□□□ 0.62
Tubd1Q9R1K7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubd1Q9R1K7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tubd1Q9R1K7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tubd1Q9R1K7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.89■□□□□ 0.62
Tubd1Q9R1K7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tubd1Q9R1K7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubd1Q9R1K7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Gm26524-201ENSMUST00000192339 390 ntBASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubd1Q9R1K7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubd1Q9R1K7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.85■□□□□ 0.61
Tubd1Q9R1K7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms