Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1aQ9QWF0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1aQ9QWF0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Gm43017-201ENSMUST00000198296 752 ntBASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Rarb-207ENSMUST00000225921 2756 ntBASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chaf1aQ9QWF0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chaf1aQ9QWF0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 Gm27801-201ENSMUST00000184174 223 ntBASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1aQ9QWF0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.65■□□□□ 0.9
Chaf1aQ9QWF0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chaf1aQ9QWF0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Chaf1aQ9QWF0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chaf1aQ9QWF0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms