Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem3Q9JKE1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem3Q9JKE1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem3Q9JKE1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Gm11421-201ENSMUST00000122124 294 ntBASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem3Q9JKE1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trem3Q9JKE1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trem3Q9JKE1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trem3Q9JKE1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trem3Q9JKE1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trem3Q9JKE1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trem3Q9JKE1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trem3Q9JKE1 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms