Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zc3h8Q9JJ48 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zc3h8Q9JJ48 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zc3h8Q9JJ48 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zc3h8Q9JJ48 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zc3h8Q9JJ48 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Zc3h8Q9JJ48 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h8Q9JJ48 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.14■□□□□ 0.33
Zc3h8Q9JJ48 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h8Q9JJ48 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h8Q9JJ48 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zc3h8Q9JJ48 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Zc3h8Q9JJ48 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Zc3h8Q9JJ48 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Zc3h8Q9JJ48 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms