Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacna1fQ9JIS7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacna1fQ9JIS7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacna1fQ9JIS7 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.27■■□□□ 1
Cacna1fQ9JIS7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacna1fQ9JIS7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cacna1fQ9JIS7 Mir6349-201ENSMUST00000184059 97 ntBASIC21.27■□□□□ 0.99
Cacna1fQ9JIS7 Gm37292-201ENSMUST00000192062 758 ntBASIC21.27■□□□□ 0.99
Cacna1fQ9JIS7 Timm23-208ENSMUST00000226683 750 ntBASIC21.27■□□□□ 0.99
Cacna1fQ9JIS7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Cacna1fQ9JIS7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Cacna1fQ9JIS7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1fQ9JIS7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 Gm6433-201ENSMUST00000118634 875 ntBASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Cacna1fQ9JIS7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1fQ9JIS7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cacna1fQ9JIS7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.24■□□□□ 0.99
Cacna1fQ9JIS7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Cacna1fQ9JIS7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1fQ9JIS7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.24■□□□□ 0.99
Cacna1fQ9JIS7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1fQ9JIS7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1fQ9JIS7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Gm42545-201ENSMUST00000202755 922 ntBASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.22■□□□□ 0.99
Cacna1fQ9JIS7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Gm9987-201ENSMUST00000069768 567 ntBASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cacna1fQ9JIS7 Gm10231-201ENSMUST00000181584 441 ntBASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Gm10175-202ENSMUST00000208752 441 ntBASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1fQ9JIS7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 Gm43183-201ENSMUST00000200632 547 ntBASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.19■□□□□ 0.98
Cacna1fQ9JIS7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Gm7889-201ENSMUST00000185591 958 ntBASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms