Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp4Q9ER80 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Gm13148-201ENSMUST00000118892 745 ntBASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Gm12441-201ENSMUST00000121806 588 ntBASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp4Q9ER80 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Gm7860-201ENSMUST00000121190 879 ntBASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtp4Q9ER80 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Gm4968-201ENSMUST00000071458 858 ntBASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Rarb-207ENSMUST00000225921 2756 ntBASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Grk6-206ENSMUST00000224995 2971 ntBASIC17.3■□□□□ 0.36
Rtp4Q9ER80 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp4Q9ER80 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtp4Q9ER80 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtp4Q9ER80 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtp4Q9ER80 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtp4Q9ER80 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtp4Q9ER80 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtp4Q9ER80 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtp4Q9ER80 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtp4Q9ER80 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtp4Q9ER80 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Gm7290-201ENSMUST00000104990 617 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms