Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.51■□□□□ 0.55
Vps35Q9EQH3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps35Q9EQH3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vps35Q9EQH3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps35Q9EQH3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vps35Q9EQH3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps35Q9EQH3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps35Q9EQH3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps35Q9EQH3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps35Q9EQH3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps35Q9EQH3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Vps35Q9EQH3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps35Q9EQH3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms