Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf3c6Q9D8P7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c6Q9D8P7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c6Q9D8P7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Gm10033-202ENSMUST00000211874 928 ntBASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Gtf3c6Q9D8P7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c6Q9D8P7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c6Q9D8P7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Gtf3c6Q9D8P7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms