Protein–RNA interactions for Protein: Q9D7T1

Rep15, Rab15 effector protein, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rep15Q9D7T1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rep15Q9D7T1 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.31■□□□□ 0.04
Rep15Q9D7T1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rep15Q9D7T1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Gm43530-201ENSMUST00000195920 274 ntBASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Gm40881-201ENSMUST00000223397 166 ntBASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rep15Q9D7T1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rep15Q9D7T1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.27■□□□□ 0.04
Rep15Q9D7T1 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.27■□□□□ 0.04
Rep15Q9D7T1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rep15Q9D7T1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rep15Q9D7T1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Rep15Q9D7T1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rep15Q9D7T1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rep15Q9D7T1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms