Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap3Q9D706 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap3Q9D706 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap3Q9D706 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap3Q9D706 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.45■□□□□ 0.86
Rpap3Q9D706 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpap3Q9D706 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Flg-201ENSMUST00000050758 1488 ntBASIC20.44■□□□□ 0.86
Rpap3Q9D706 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Gm18666-201ENSMUST00000190039 958 ntBASIC20.44■□□□□ 0.86
Rpap3Q9D706 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpap3Q9D706 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpap3Q9D706 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpap3Q9D706 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpap3Q9D706 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpap3Q9D706 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpap3Q9D706 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rpap3Q9D706 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.42■□□□□ 0.86
Rpap3Q9D706 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpap3Q9D706 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.41■□□□□ 0.86
Rpap3Q9D706 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpap3Q9D706 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.4■□□□□ 0.86
Rpap3Q9D706 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rpap3Q9D706 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.4■□□□□ 0.86
Rpap3Q9D706 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rpap3Q9D706 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Rpap3Q9D706 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpap3Q9D706 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rpap3Q9D706 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpap3Q9D706 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rpap3Q9D706 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpap3Q9D706 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.39■□□□□ 0.85
Rpap3Q9D706 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpap3Q9D706 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpap3Q9D706 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rpap3Q9D706 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rpap3Q9D706 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rpap3Q9D706 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Gm11927-201ENSMUST00000118472 759 ntBASIC20.38■□□□□ 0.85
Rpap3Q9D706 Gm13158-201ENSMUST00000122007 736 ntBASIC20.38■□□□□ 0.85
Rpap3Q9D706 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rpap3Q9D706 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.38■□□□□ 0.85
Rpap3Q9D706 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.38■□□□□ 0.85
Rpap3Q9D706 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Rpap3Q9D706 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms