Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubgcp4Q9D4F8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tubgcp4Q9D4F8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Gm37856-201ENSMUST00000191634 999 ntBASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubgcp4Q9D4F8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubgcp4Q9D4F8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Gm27275-201ENSMUST00000184318 272 ntBASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.74■□□□□ 0.75
Tubgcp4Q9D4F8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Gm12896-201ENSMUST00000118430 226 ntBASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubgcp4Q9D4F8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubgcp4Q9D4F8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Gm20760-201ENSMUST00000179197 648 ntBASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Gm44549-201ENSMUST00000208351 577 ntBASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tubgcp4Q9D4F8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubgcp4Q9D4F8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubgcp4Q9D4F8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubgcp4Q9D4F8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tubgcp4Q9D4F8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tubgcp4Q9D4F8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms