Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Gm13234-201ENSMUST00000120010 747 ntBASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Khdc3Q9CWU5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.77■□□□□ 0.44
Khdc3Q9CWU5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Khdc3Q9CWU5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Khdc3Q9CWU5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc3Q9CWU5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Gm13146-201ENSMUST00000118508 780 ntBASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Khdc3Q9CWU5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.74■□□□□ 0.43
Khdc3Q9CWU5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc3Q9CWU5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc3Q9CWU5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Khdc3Q9CWU5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.73■□□□□ 0.43
Khdc3Q9CWU5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc3Q9CWU5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Khdc3Q9CWU5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms