Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrc40Q9CRC8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Gm13234-201ENSMUST00000120010 747 ntBASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Gm13534-201ENSMUST00000121169 513 ntBASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrc40Q9CRC8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrc40Q9CRC8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrc40Q9CRC8 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.39■□□□□ 0.54
Lrrc40Q9CRC8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lrrc40Q9CRC8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.39■□□□□ 0.53
Lrrc40Q9CRC8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lrrc40Q9CRC8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc40Q9CRC8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms