Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.12■□□□□ 0.97
Trim11Q99PQ2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim11Q99PQ2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim11Q99PQ2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim11Q99PQ2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim11Q99PQ2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trim11Q99PQ2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim11Q99PQ2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim11Q99PQ2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim11Q99PQ2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim11Q99PQ2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Trim11Q99PQ2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim11Q99PQ2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim11Q99PQ2 Gm13234-201ENSMUST00000120010 747 ntBASIC21.08■□□□□ 0.97
Trim11Q99PQ2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Trim11Q99PQ2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim11Q99PQ2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim11Q99PQ2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Gm13534-201ENSMUST00000121169 513 ntBASIC21.07■□□□□ 0.96
Trim11Q99PQ2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.07■□□□□ 0.96
Trim11Q99PQ2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim11Q99PQ2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim11Q99PQ2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim11Q99PQ2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms