Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Timm23-208ENSMUST00000226683 750 ntBASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Gm18959-201ENSMUST00000208954 655 ntBASIC19.1■□□□□ 0.65
Cdh23Q99PF4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.1■□□□□ 0.65
Cdh23Q99PF4 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh23Q99PF4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh23Q99PF4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cdh23Q99PF4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Gm43183-201ENSMUST00000200632 547 ntBASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Gm42545-201ENSMUST00000202755 922 ntBASIC19.07■□□□□ 0.64
Cdh23Q99PF4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Gm18025-201ENSMUST00000221733 862 ntBASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh23Q99PF4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Gm45058-201ENSMUST00000205810 766 ntBASIC19.05■□□□□ 0.64
Cdh23Q99PF4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.05■□□□□ 0.64
Cdh23Q99PF4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh23Q99PF4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Mtag2-201ENSMUST00000058665 714 ntBASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Gm28033-201ENSMUST00000184224 96 ntBASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cdh23Q99PF4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.03■□□□□ 0.64
Cdh23Q99PF4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh23Q99PF4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh23Q99PF4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh23Q99PF4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh23Q99PF4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms