Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm7284-201ENSMUST00000131667 944 ntBASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col25a1Q99MQ5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col25a1Q99MQ5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col25a1Q99MQ5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col25a1Q99MQ5 Gm28033-201ENSMUST00000184224 96 ntBASIC19.22■□□□□ 0.67
Col25a1Q99MQ5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.22■□□□□ 0.67
Col25a1Q99MQ5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col25a1Q99MQ5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col25a1Q99MQ5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Gm18032-201ENSMUST00000222541 538 ntBASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.21■□□□□ 0.67
Col25a1Q99MQ5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Gm7063-201ENSMUST00000186840 981 ntBASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Mzt1-203ENSMUST00000227948 952 ntBASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col25a1Q99MQ5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Col25a1Q99MQ5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col25a1Q99MQ5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Gm18959-201ENSMUST00000208954 655 ntBASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col25a1Q99MQ5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms