Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr3Q99MB1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr3Q99MB1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tlr3Q99MB1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tlr3Q99MB1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Tlr3Q99MB1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Tlr3Q99MB1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Tlr3Q99MB1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tlr3Q99MB1 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Gm6420-201ENSMUST00000193885 723 ntBASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tlr3Q99MB1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tlr3Q99MB1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Nespas-201ENSMUST00000143738 1083 ntBASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr3Q99MB1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr3Q99MB1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tlr3Q99MB1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tlr3Q99MB1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tlr3Q99MB1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tlr3Q99MB1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms