Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cstf1Q99LC2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cstf1Q99LC2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Gm7367-201ENSMUST00000057611 492 ntBASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cstf1Q99LC2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cstf1Q99LC2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cstf1Q99LC2 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cstf1Q99LC2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cstf1Q99LC2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms