Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha1Q91Y21 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha1Q91Y21 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha1Q91Y21 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdha1Q91Y21 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdha1Q91Y21 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha1Q91Y21 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha1Q91Y21 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha1Q91Y21 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha1Q91Y21 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Gm37856-201ENSMUST00000191634 999 ntBASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha1Q91Y21 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Gm8520-201ENSMUST00000186517 868 ntBASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Pcdha1Q91Y21 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Gm22240-201ENSMUST00000175225 82 ntBASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha1Q91Y21 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha1Q91Y21 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha1Q91Y21 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha1Q91Y21 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms