Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha3Q91Y16 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha3Q91Y16 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha3Q91Y16 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha3Q91Y16 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdha3Q91Y16 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha3Q91Y16 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdha3Q91Y16 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha3Q91Y16 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.33■□□□□ 0.68
Pcdha3Q91Y16 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdha3Q91Y16 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha3Q91Y16 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha3Q91Y16 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha3Q91Y16 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha3Q91Y16 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha3Q91Y16 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Gm6420-201ENSMUST00000193885 723 ntBASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha3Q91Y16 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha3Q91Y16 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms