Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Gm12933-201ENSMUST00000120203 872 ntBASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdha9Q91Y11 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha9Q91Y11 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha9Q91Y11 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Gm6211-202ENSMUST00000167849 925 ntBASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Mir5133-201ENSMUST00000174955 77 ntBASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha9Q91Y11 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha9Q91Y11 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdha9Q91Y11 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha9Q91Y11 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms