Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhb6Q91XZ4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Nespas-201ENSMUST00000143738 1083 ntBASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Gm26571-201ENSMUST00000181399 666 ntBASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb6Q91XZ4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Gm8495-201ENSMUST00000188740 694 ntBASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb6Q91XZ4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb6Q91XZ4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb6Q91XZ4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb6Q91XZ4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb6Q91XZ4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb6Q91XZ4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb6Q91XZ4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb6Q91XZ4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb6Q91XZ4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb6Q91XZ4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb6Q91XZ4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb6Q91XZ4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms