Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb2Q91XX7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb2Q91XX7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb2Q91XX7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb2Q91XX7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb2Q91XX7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgb2Q91XX7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgb2Q91XX7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Gm7860-201ENSMUST00000121190 879 ntBASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb2Q91XX7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhgb2Q91XX7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb2Q91XX7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb2Q91XX7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb2Q91XX7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhgb2Q91XX7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb2Q91XX7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb2Q91XX7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb2Q91XX7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms