Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc3Q91XX1 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc3Q91XX1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhgc3Q91XX1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhgc3Q91XX1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhgc3Q91XX1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc3Q91XX1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Gm12922-201ENSMUST00000120626 809 ntBASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc3Q91XX1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgc3Q91XX1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgc3Q91XX1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc3Q91XX1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms