Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb17Q91VD8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Gm10602-201ENSMUST00000098239 609 ntBASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb17Q91VD8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Gm29257-201ENSMUST00000186115 639 ntBASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb17Q91VD8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb17Q91VD8 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.14■□□□□ 0.66
Pcdhb17Q91VD8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb17Q91VD8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.14■□□□□ 0.65
Pcdhb17Q91VD8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb17Q91VD8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Gm26524-201ENSMUST00000192339 390 ntBASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb17Q91VD8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb17Q91VD8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms