Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TraipQ8VIG6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Gm11927-201ENSMUST00000118472 759 ntBASIC19.74■□□□□ 0.75
TraipQ8VIG6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.74■□□□□ 0.75
TraipQ8VIG6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.74■□□□□ 0.75
TraipQ8VIG6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.73■□□□□ 0.75
TraipQ8VIG6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TraipQ8VIG6 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.73■□□□□ 0.75
TraipQ8VIG6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Zfp783-201ENSMUST00000095946 670 ntBASIC19.72■□□□□ 0.75
TraipQ8VIG6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TraipQ8VIG6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TraipQ8VIG6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Gm15378-201ENSMUST00000121894 207 ntBASIC19.71■□□□□ 0.75
TraipQ8VIG6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.71■□□□□ 0.75
TraipQ8VIG6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TraipQ8VIG6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TraipQ8VIG6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TraipQ8VIG6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TraipQ8VIG6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TraipQ8VIG6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TraipQ8VIG6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TraipQ8VIG6 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.7■□□□□ 0.74
TraipQ8VIG6 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.7■□□□□ 0.74
TraipQ8VIG6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.7■□□□□ 0.74
TraipQ8VIG6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TraipQ8VIG6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TraipQ8VIG6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TraipQ8VIG6 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.69■□□□□ 0.74
TraipQ8VIG6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TraipQ8VIG6 Gm10698-201ENSMUST00000182663 604 ntBASIC19.68■□□□□ 0.74
TraipQ8VIG6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TraipQ8VIG6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TraipQ8VIG6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TraipQ8VIG6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.68■□□□□ 0.74
TraipQ8VIG6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms