Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40cQ8VHQ4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40cQ8VHQ4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rab40cQ8VHQ4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rab40cQ8VHQ4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Gm22238-201ENSMUST00000175222 88 ntBASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rab40cQ8VHQ4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rab40cQ8VHQ4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rab40cQ8VHQ4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rab40cQ8VHQ4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rab40cQ8VHQ4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rab40cQ8VHQ4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rab40cQ8VHQ4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rab40cQ8VHQ4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms