Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lmcd1Q8VEE1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Zfp783-201ENSMUST00000095946 670 ntBASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lmcd1Q8VEE1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Gm15375-201ENSMUST00000119510 849 ntBASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Gm45058-201ENSMUST00000205810 766 ntBASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.78■□□□□ 0.76
Lmcd1Q8VEE1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Gm37292-201ENSMUST00000192062 758 ntBASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Gm42545-201ENSMUST00000202755 922 ntBASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.77■□□□□ 0.76
Lmcd1Q8VEE1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lmcd1Q8VEE1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmcd1Q8VEE1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmcd1Q8VEE1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.76■□□□□ 0.75
Lmcd1Q8VEE1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmcd1Q8VEE1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmcd1Q8VEE1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lmcd1Q8VEE1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmcd1Q8VEE1 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.73■□□□□ 0.75
Lmcd1Q8VEE1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.72■□□□□ 0.75
Lmcd1Q8VEE1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms