Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpusd1Q8VCZ8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpusd1Q8VCZ8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpusd1Q8VCZ8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Gm715-201ENSMUST00000117865 831 ntBASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Gm11927-201ENSMUST00000118472 759 ntBASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpusd1Q8VCZ8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpusd1Q8VCZ8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpusd1Q8VCZ8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Mir1199-201ENSMUST00000117015 119 ntBASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpusd1Q8VCZ8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms