Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Vps39Q8R5L3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps39Q8R5L3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps39Q8R5L3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps39Q8R5L3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps39Q8R5L3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps39Q8R5L3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps39Q8R5L3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.52■□□□□ 0.55
Vps39Q8R5L3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps39Q8R5L3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps39Q8R5L3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps39Q8R5L3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms