Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slf1Q8R3P9 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slf1Q8R3P9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Slf1Q8R3P9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.68■□□□□ 0.58
Slf1Q8R3P9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slf1Q8R3P9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slf1Q8R3P9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.66■□□□□ 0.58
Slf1Q8R3P9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slf1Q8R3P9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.65■□□□□ 0.58
Slf1Q8R3P9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slf1Q8R3P9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Gm9847-201ENSMUST00000052528 599 ntBASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slf1Q8R3P9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms