Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim2Q8R1G6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim2Q8R1G6 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim2Q8R1G6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pdlim2Q8R1G6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pdlim2Q8R1G6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim2Q8R1G6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.35■■□□□ 1.01
Pdlim2Q8R1G6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.34■■□□□ 1.01
Pdlim2Q8R1G6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Gm9870-201ENSMUST00000063874 645 ntBASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim2Q8R1G6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pdlim2Q8R1G6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pdlim2Q8R1G6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC21.33■■□□□ 1
Pdlim2Q8R1G6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Pdlim2Q8R1G6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim2Q8R1G6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Etf1-202ENSMUST00000180351 108 ntBASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim2Q8R1G6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim2Q8R1G6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms