Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Syne4Q8CII8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Syne4Q8CII8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Syne4Q8CII8 Gm10138-203ENSMUST00000206952 366 ntBASIC21.08■□□□□ 0.97
Syne4Q8CII8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.08■□□□□ 0.97
Syne4Q8CII8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Syne4Q8CII8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.07■□□□□ 0.96
Syne4Q8CII8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syne4Q8CII8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Syne4Q8CII8 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.06■□□□□ 0.96
Syne4Q8CII8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Syne4Q8CII8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Syne4Q8CII8 Gm42545-201ENSMUST00000202755 922 ntBASIC21.06■□□□□ 0.96
Syne4Q8CII8 Gm18025-201ENSMUST00000221733 862 ntBASIC21.06■□□□□ 0.96
Syne4Q8CII8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne4Q8CII8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne4Q8CII8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Syne4Q8CII8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Syne4Q8CII8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syne4Q8CII8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne4Q8CII8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Syne4Q8CII8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Syne4Q8CII8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.05■□□□□ 0.96
Syne4Q8CII8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne4Q8CII8 Gm21362-201ENSMUST00000194272 928 ntBASIC21.05■□□□□ 0.96
Syne4Q8CII8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.05■□□□□ 0.96
Syne4Q8CII8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Syne4Q8CII8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syne4Q8CII8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syne4Q8CII8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Gm15375-201ENSMUST00000119510 849 ntBASIC21.03■□□□□ 0.96
Syne4Q8CII8 Gm13559-201ENSMUST00000120476 863 ntBASIC21.03■□□□□ 0.96
Syne4Q8CII8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Gm10819-201ENSMUST00000099988 561 ntBASIC21.03■□□□□ 0.96
Syne4Q8CII8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Syne4Q8CII8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.02■□□□□ 0.96
Syne4Q8CII8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.02■□□□□ 0.96
Syne4Q8CII8 Gm11539-201ENSMUST00000119837 557 ntBASIC21.02■□□□□ 0.96
Syne4Q8CII8 Gm13436-201ENSMUST00000120418 567 ntBASIC21.02■□□□□ 0.96
Syne4Q8CII8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syne4Q8CII8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Syne4Q8CII8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syne4Q8CII8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syne4Q8CII8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syne4Q8CII8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne4Q8CII8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne4Q8CII8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne4Q8CII8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Syne4Q8CII8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Syne4Q8CII8 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.01■□□□□ 0.95
Syne4Q8CII8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne4Q8CII8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syne4Q8CII8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne4Q8CII8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne4Q8CII8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Syne4Q8CII8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Syne4Q8CII8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21■□□□□ 0.95
Syne4Q8CII8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne4Q8CII8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms