Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Rab11fip3Q8CHD8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab11fip3Q8CHD8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Gm18688-201ENSMUST00000204695 1859 ntBASIC24.02■■□□□ 1.44
Rab11fip3Q8CHD8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 AC107452.1-201ENSMUST00000227963 481 ntBASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rab11fip3Q8CHD8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 Gm13158-201ENSMUST00000122007 736 ntBASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Rab11fip3Q8CHD8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rab11fip3Q8CHD8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rab11fip3Q8CHD8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab11fip3Q8CHD8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Gm11927-201ENSMUST00000118472 759 ntBASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab11fip3Q8CHD8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rab11fip3Q8CHD8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Rab11fip3Q8CHD8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Rab11fip3Q8CHD8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
Rab11fip3Q8CHD8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Rab11fip3Q8CHD8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rab11fip3Q8CHD8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rab11fip3Q8CHD8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rab11fip3Q8CHD8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rab11fip3Q8CHD8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Rab11fip3Q8CHD8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC23.94■■□□□ 1.42
Rab11fip3Q8CHD8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Rab11fip3Q8CHD8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rab11fip3Q8CHD8 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.94■■□□□ 1.42
Rab11fip3Q8CHD8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms