Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.48■□□□□ 0.71
Rp1l1Q8CGM2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rp1l1Q8CGM2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.46■□□□□ 0.71
Rp1l1Q8CGM2 AA414768-201ENSMUST00000121924 1257 ntBASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Ank2-226ENSMUST00000189368 339 ntBASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rp1l1Q8CGM2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.44■□□□□ 0.7
Rp1l1Q8CGM2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Gm38285-201ENSMUST00000192928 922 ntBASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rp1l1Q8CGM2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Gm17971-201ENSMUST00000190239 806 ntBASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rp1l1Q8CGM2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rp1l1Q8CGM2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Gm9103-201ENSMUST00000119371 405 ntBASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Mir6349-201ENSMUST00000184059 97 ntBASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms